Examples

Real, runnable before/after walkthroughs. Each command block on these pages is the actual output of the shipped galaxy-tool-refactor CLI, not a mock-up.

• A complete pass: check, format, upgrade
• Using the library instead of the CLI
• Issues planemo reports that we fix
• Demo: rename a tool parameter, everywhere, in one command
• When it can’t fix it: actionable stops, not silent guesses